That's wild. I have the EV13 in mine and it went in solid. The only time I have noticed excessive bucking given that everything else is good to go, is pilot jet fuel delivery. I have it static timed to 0 degrees and on the most aggressive timing map available.
I doubt a coil or timing module that is bad at low rpm is going to be good at upper rpm. But I could be wrong.
However, considering my jet settings are lower than pretty much everyone expected them to be (disregarding 10:1), it's something I would consider, dropping down a number and seeing if it's more rideable between idle and 3000rpm. I'm kinda siding with tall_terry on that one. Tune your carb I think is the next step. My tunes are in my sig...yours are going to be a bit fatter since the stock 8.5:1 isn't going to be as fuel efficient, but shouldn't be 46 kind of fatter.