with what you have used,, there should be no interference from the components,,, however,, shiittee happens,, you heard a wierd nouse,,, 1 time,, if you are confident you made no mistakes and over looked nothing,, ysu are satisfied with tour work,,, button it up and light it up.. uf you have any doubts,,, take it apart and check everything...
from your questions i assume this is your first, or one of your first engine builds.. with that in mind,, there is a greater potential,, something could need a little attention...
us old guys that have built literally1000's of engines, and not 1 stocker,, know our builds are as good as it gets,,, doing a warranty repair on an engine can get expensive fast,,, and even though you give the client no grief, and do the repair no charge and quickly, it is still a hit to the reputation, which is everything in the harley world..